Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ32841.1COG1538 Outer membrane protein. (415 aa)    
Predicted Functional Partners:
EAQ32840.1
Membrane-fusion protein, RND family efflux system component; COG0845 Membrane-fusion protein.
 
 0.972
EAQ32839.1
Metal efflux system membrane component (silver efflux pump related); COG3696 Putative silver efflux pump.
 
 
 0.948
EAQ32935.1
Membrane-fusion protein, RND-like efflux system component; COG0845 Membrane-fusion protein.
 
 0.792
EAQ32842.1
Hypothetical protein.
       0.678
EAQ32779.1
COG1566 Multidrug resistance efflux pump.
  
 0.677
EAQ32963.1
Membrane-fusion protein, RND family efflux system component; COG0845 Membrane-fusion protein.
 
 0.663
EAQ32918.1
Membrane-fusion protein, RND family efflux system component; COG0845 Membrane-fusion protein.
 
 0.656
EAQ31589.1
Probable Co/Zn/Cd efflux system membrane fusion protein; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.639
EAQ32936.1
COG1538 Outer membrane protein.
  
  
  0.615
EAQ32981.1
ABC transporter permease; COG0845 Membrane-fusion protein.
 
  0.614
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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