STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32843.1COG0597 Lipoprotein signal peptidase. (167 aa)    
Predicted Functional Partners:
EAQ32844.1
Co/Zn/Cd efflux system component; COG2217 Cation transport ATPase.
 
     0.803
EAQ32842.1
Hypothetical protein.
       0.570
EAQ32914.1
COG3464 Transposase and inactivated derivatives.
 
     0.550
EAQ32845.1
Transcriptional regulator, MerR family protein; COG0789 Predicted transcriptional regulators.
       0.546
EAQ32952.1
COG3464 Transposase and inactivated derivatives.
 
     0.520
EAQ32840.1
Membrane-fusion protein, RND family efflux system component; COG0845 Membrane-fusion protein.
       0.467
EAQ32841.1
COG1538 Outer membrane protein.
       0.467
EAQ32839.1
Metal efflux system membrane component (silver efflux pump related); COG3696 Putative silver efflux pump.
       0.456
EAQ32953.1
COG3464 Transposase and inactivated derivatives.
 
     0.427
EAQ31851.1
COG0060 Isoleucyl-tRNA synthetase.
 
  
 0.422
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.