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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ30848.1Lipoprotein, putative. (245 aa)    
Predicted Functional Partners:
EAQ30846.1
Fusion of WbfC- and WbfB-like uncharacterized domains involved in polysaccharide synthesis.
 
  
 0.967
EAQ30847.1
Hypothetical protein; COG0531 Amino acid transporters.
       0.773
EAQ30845.1
COG1004 Predicted UDP-glucose 6-dehydrogenase.
  
    0.764
EAQ30956.1
Hypothetical protein.
  
     0.741
pgi
COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
       0.586
EAQ33104.1
COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain.
  
     0.584
EAQ33037.1
Uncharacterized conserved membrane protein, VanZ family protein; COG5652 Predicted integral membrane protein.
 
     0.573
galE
COG1087 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.532
EAQ30849.1
Hypothetical protein.
       0.532
EAQ33142.1
Hypothetical protein.
  
     0.527
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.