Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ33124.1COG4152 ABC-type uncharacterized transport system, ATPase component. (315 aa)    
Predicted Functional Partners:
EAQ33123.1
COG1668 ABC-type Na+ efflux pump, permease component.
 
  
 0.946
pckA
Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
       0.581
EAQ32763.1
COG1131 ABC-type multidrug transport system, ATPase component.
 
  
 
0.546
EAQ31001.1
COG0100 Ribosomal protein S11.
  
     0.525
EAQ30995.1
COG0098 Ribosomal protein S5.
  
     0.509
EAQ32379.1
COG1131 ABC-type multidrug transport system, ATPase component.
 
  
 
0.500
EAQ30990.1
COG0094 Ribosomal protein L5.
  
     0.483
cysS
COG0215 Cysteinyl-tRNA synthetase.
  
     0.445
rplN
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
     0.435
ksgA
COG0030 Dimethyladenosine transferase (rRNA methylation); Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
 
     0.431
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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