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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pckAPhosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. (534 aa)    
Predicted Functional Partners:
EAQ31708.1
Fumarase B; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
   
 
 0.914
EAQ31678.1
COG5016 Pyruvate/oxaloacetate carboxyltransferase.
    
 0.910
EAQ30917.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
     
 0.891
EAQ31575.1
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate.
 
 
 0.879
EAQ32073.1
Enolase; COG0148 Enolase.
  
 
 0.864
EAQ31226.1
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
     
 0.861
pyk
Pyruvate kinase II, glucose stimulated; COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.861
EAQ32971.1
COG0165 Argininosuccinate lyase.
  
 
 0.851
EAQ31679.1
Oxaloacetate decarboxylase, beta subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the GcdB/MmdB/OadB family.
    
 0.838
gltA
COG0372 Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.837
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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