STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kbl2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. (396 aa)    
Predicted Functional Partners:
tdh
L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.
 
 
 0.996
EAQ30851.1
COG2198 FOG: HPt domain.
  
 
 0.906
EAQ31681.1
Hybrid sensor histidine kinase (HisK, 2 CheY, Hpt domains); COG0642 Signal transduction histidine kinase.
  
 
 0.906
EAQ33002.1
COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain.
  
 
 0.900
EAQ30810.1
Biotin operon repressor/biotin--protein ligase fusion protein; COG1654 Biotin operon repressor.
  
 
 0.869
EAQ31450.1
COG0112 Glycine/serine hydroxymethyltransferase.
  
 
 0.841
EAQ31220.1
COG0132 Dethiobiotin synthetase.
 
 
 0.834
EAQ33131.1
Membrane serine peptidase; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
  
    0.821
EAQ33184.1
COG2008 Threonine aldolase.
     
 0.813
EAQ30963.1
COG0591 Na+/proline symporter.
  
 
 0.809
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.