Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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nfuAHypothetical protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. (192 aa)    
Predicted Functional Partners:
EAQ31081.1
NifS; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
 0.972
EAQ32704.1
COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit.
  
 0.933
EAQ33271.1
Aminotransferase NifS, class V; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
 0.929
EAQ31428.1
COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
 0.929
djlA
Dna-J like membrane chaperone protein; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host.
  
 
 0.883
EAQ32545.1
COG1145 Ferredoxin.
  
  
 0.875
erpA
HesB/IscA family protein; Required for insertion of 4Fe-4S clusters for at least IspG.
  
 
 0.810
EAQ31127.1
COG0320 Lipoate synthase.
  
 0.801
EAQ31166.1
Predicted aminomethyltransferase, GcvT family protein; COG0354 Predicted aminomethyltransferase related to GcvT; Belongs to the GcvT family.
  
 
 0.768
EAQ33248.1
Cysteine desulfurase activator ATPase; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
  
 
 0.753
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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