Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAQ33152.1Competence protein; COG1040 Predicted amidophosphoribosyltransferases. (151 aa)    
Predicted Functional Partners:
EAQ32714.1
DNA uptake-related membrane-associated competence protein; COG0658 Predicted membrane metal-binding protein.
 
  
 0.805
nfuA
Hypothetical protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
       0.701
dprA
COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.
  
 
 0.649
bioH
Alpha/beta superfamily hydrolase; The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters.
 
   
 0.614
flgC
COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.609
tyrA
COG1605 Chorismate mutase.
  
    0.559
ribD
Riboflavin-specific deaminase/reductase; COG0117 Pyrimidine deaminase.
 
   
 0.531
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.512
gpt
Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.
   
    0.512
EAQ31681.1
Hybrid sensor histidine kinase (HisK, 2 CheY, Hpt domains); COG0642 Signal transduction histidine kinase.
  
    0.498
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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