STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ33157.1Prolyl 4-hydroxylase alpha subunit-like protein, 2OG-Fe(II) oxygenase family protein; COG3751 Predicted proline hydroxylase. (210 aa)    
Predicted Functional Partners:
EAQ31374.1
COG0050 GTPases - translation elongation factors.
   
   0.889
EAQ33156.1
Uncharacterized conserved secreted or membrane protein.
       0.619
EAQ33155.1
COG0266 Formamidopyrimidine-DNA glycosylase.
       0.544
EAQ31292.1
COG1444 Predicted P-loop ATPase fused to an acetyltransferase.
  
    0.496
mutM
Formamidopyrimidine DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.
       0.473
EAQ31816.1
Sterol desaturase-related protein; COG3000 Sterol desaturase.
   
  
 0.468
EAQ33341.1
COG0408 Coproporphyrinogen III oxidase.
   
  
 0.454
pyrG
COG0504 CTP synthase (UTP-ammonia lyase).
   
    0.403
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.