rpoH protein (Idiomarina baltica) - STRING interaction network

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rpoH

RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. (286 aa)

Predicted Functional Partners:

EAQ31379.1

0.965

rpoZ

0.945

EAQ31200.1

0.932

EAQ31378.1

0.915

dnaK

0.908

EAQ31003.1

0.903

groEL

0.887

EAQ33175.1

0.853

EAQ33236.1

0.783

nusA

0.778

Your Current Organism:

Idiomarina baltica

NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ31003.1	EAQ31378.1	OS145_09960	OS145_05685	COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit.	COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit.	0.998
EAQ31003.1	EAQ31379.1	OS145_09960	OS145_05690	COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit.	COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit.	0.998
EAQ31003.1	EAQ33236.1	OS145_09960	OS145_02670	COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit.	Anaerobic regulatory protein; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.	0.853
EAQ31003.1	dnaK	OS145_09960	OS145_12320	COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit.	COG0443 Molecular chaperone.	0.723
EAQ31003.1	groEL	OS145_09960	OS145_08137	COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit.	COG0459 Chaperonin GroEL (HSP60 family).	0.659
EAQ31003.1	nusA	OS145_09960	OS145_12405	COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit.	COG0195 Transcription elongation factor.	0.988
EAQ31003.1	rpoH	OS145_09960	OS145_02345	COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit.	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.	0.903
EAQ31003.1	rpoZ	OS145_09960	OS145_08582	COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit.	DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.996
EAQ31200.1	EAQ31379.1	OS145_12325	OS145_05690	COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.	COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit.	0.670
EAQ31200.1	EAQ33175.1	OS145_12325	OS145_02365	COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.	COG0552 Signal recognition particle GTPase.	0.452
EAQ31200.1	dnaK	OS145_12325	OS145_12320	COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.	COG0443 Molecular chaperone.	0.999
EAQ31200.1	groEL	OS145_12325	OS145_08137	COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.	COG0459 Chaperonin GroEL (HSP60 family).	0.985
EAQ31200.1	rpoH	OS145_12325	OS145_02345	COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.	0.932
EAQ31378.1	EAQ31003.1	OS145_05685	OS145_09960	COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit.	COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit.	0.998
EAQ31378.1	EAQ31379.1	OS145_05685	OS145_05690	COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit.	COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit.	0.999
EAQ31378.1	EAQ33236.1	OS145_05685	OS145_02670	COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit.	Anaerobic regulatory protein; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.	0.866
EAQ31378.1	dnaK	OS145_05685	OS145_12320	COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit.	COG0443 Molecular chaperone.	0.698
EAQ31378.1	groEL	OS145_05685	OS145_08137	COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit.	COG0459 Chaperonin GroEL (HSP60 family).	0.744
EAQ31378.1	nusA	OS145_05685	OS145_12405	COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit.	COG0195 Transcription elongation factor.	0.981
EAQ31378.1	rpoH	OS145_05685	OS145_02345	COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit.	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.	0.915

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