STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ33183.1COG0031 Cysteine synthase. (321 aa)    
Predicted Functional Partners:
EAQ33182.1
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
 
 0.995
EAQ32992.1
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
 
 0.974
cysE
COG1045 Serine acetyltransferase.
 
 0.963
EAQ31898.1
COG1045 Serine acetyltransferase.
 
 0.962
EAQ30835.1
COG0499 S-adenosylhomocysteine hydrolase.
 
 0.937
EAQ31450.1
COG0112 Glycine/serine hydroxymethyltransferase.
  
 
 0.924
EAQ33179.1
COG1171 Threonine dehydratase.
 
  
 0.922
EAQ32035.1
Methionine gamma-lyase; COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
 
 0.920
EAQ31402.1
COG2873 O-acetylhomoserine sulfhydrylase.
  
 
 0.919
EAQ31658.1
COG0159 Tryptophan synthase alpha chain.
    
 0.912
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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