STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ33184.1COG2008 Threonine aldolase. (337 aa)    
Predicted Functional Partners:
EAQ33002.1
COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain.
    
 0.945
EAQ31450.1
COG0112 Glycine/serine hydroxymethyltransferase.
    
 0.940
EAQ33179.1
COG1171 Threonine dehydratase.
   
 
 0.923
kbl
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
     
 0.906
tdh
L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.
     
  0.905
EAQ33183.1
COG0031 Cysteine synthase.
    
  0.727
ychF
Predicted GTPase, probable translation factor; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
      0.720
EAQ33182.1
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
       0.637
fadH
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
    
  0.619
EAQ30936.1
COG2025 Electron transfer flavoprotein, alpha subunit.
    
  0.613
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.