STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ33184.1COG2008 Threonine aldolase. (337 aa)    
Predicted Functional Partners:
EAQ33002.1
COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain.
    
 0.907
EAQ31450.1
COG0112 Glycine/serine hydroxymethyltransferase.
    
 0.857
kbl
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
     
 0.813
EAQ33183.1
COG0031 Cysteine synthase.
    
 0.741
ychF
Predicted GTPase, probable translation factor; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
      0.722
EAQ33182.1
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
  
 
  0.643
EAQ33179.1
COG1171 Threonine dehydratase.
   
 
 0.545
EAQ31642.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
  
 
 0.476
EAQ33004.1
Aminomethyltransferase; COG0404 Glycine cleavage system T protein (aminomethyltransferase).
   
 0.474
EAQ30917.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
     
 0.468
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.