STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ33185.1COG0606 Predicted ATPase with chaperone activity. (212 aa)    
Predicted Functional Partners:
EAQ33220.1
COG0606 Predicted ATPase with chaperone activity.
 
     0.976
dprA
COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.
 
 
 0.827
EAQ31631.1
COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family.
 
    0.741
EAQ32714.1
DNA uptake-related membrane-associated competence protein; COG0658 Predicted membrane metal-binding protein.
 
  
 0.618
EAQ31891.1
COG0817 Holliday junction resolvasome, endonuclease subunit.
  
   
 0.405
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.