Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
EAQ33192.1COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing). (60 aa)    
Predicted Functional Partners:
hfq
Host factor I-like protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.
   
  
 0.601
EAQ32431.1
Bacterial nucleoid DNA-binding protein, IHF alpha subunit; COG0776 Bacterial nucleoid DNA-binding protein.
  
 
 0.599
EAQ33191.1
Hypothetical protein.
       0.533
EAQ31348.1
Type II secretory pathway, pseudopilin.
   
    0.505
EAQ31837.1
COG1344 Flagellin and related hook-associated proteins.
 
  
 0.456
ihfB
Bacterial nucleoid DNA-binding protein, IHF beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
  
 
 0.451
EAQ33193.1
Hypothetical protein.
       0.450
EAQ33194.1
Hypothetical protein.
       0.450
EAQ30931.1
Chemotaxis response regulator; COG0784 FOG: CheY-like receiver.
  
   0.433
dksA
DnaK; COG1734 DnaK suppressor protein.
   
  
 0.423
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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