Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ33222.1COG2960 Uncharacterized protein conserved in bacteria. (83 aa)    
Predicted Functional Partners:
EAQ33221.1
COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
       0.781
smg
COG2922 Uncharacterized protein conserved in bacteria; Belongs to the Smg family.
  
     0.731
rep
Rep helicase, a single-stranded DNA dependent ATPase; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.
       0.670
lptE
Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.
  
     0.629
EAQ33220.1
COG0606 Predicted ATPase with chaperone activity.
       0.561
EAQ32266.1
COG3165 Uncharacterized protein conserved in bacteria.
  
   
 0.540
zapD
Hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.
  
     0.497
EAQ31420.1
COG2976 Uncharacterized protein conserved in bacteria.
  
     0.444
EAQ33343.1
COG0551 Zn-finger domain associated with topoisomerase type I.
  
     0.436
EAQ31129.1
Hypothetical protein; Belongs to the UPF0250 family.
  
     0.413
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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