Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ33231.1GGDEF domain protein; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain. (343 aa)    
Predicted Functional Partners:
EAQ32660.1
Hypothetical protein; COG0784 FOG: CheY-like receiver.
 
  0.878
EAQ30932.1
PAS domain containing signalling protein.
 
      0.861
EAQ31934.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
  0.849
EAQ32741.1
Signaling protein; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
  
  0.830
EAQ33074.1
Membrane-anchored signaling protein (PAS,GGDEF,EAL domains); COG2199 FOG: GGDEF domain.
  
  0.824
EAQ31364.1
Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like; COG2202 FOG: PAS/PAC domain.
  
  0.822
EAQ32793.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
  
  0.820
EAQ32806.1
Putative two-component response regulator; COG2200 FOG: EAL domain.
 
 
  0.816
EAQ32664.1
Signaling protein; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
  
  0.816
EAQ30894.1
Signaling protein with a sensor domain, HAMP, GGDEF and EAL domains; COG2199 FOG: GGDEF domain.
  
  0.797
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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