Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ33234.1COG2832 Uncharacterized protein conserved in bacteria. (128 aa)    
Predicted Functional Partners:
EAQ31238.1
Uncharacterized conserved membrane protein.
   
    0.790
hemN
COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
     0.636
EAQ33233.1
COG3296 Uncharacterized protein conserved in bacteria.
       0.581
EAQ32554.1
Heme/copper membrane protein; COG3213 Uncharacterized protein involved in response to NO.
 
     0.451
EAQ33236.1
Anaerobic regulatory protein; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
  
    0.424
EAQ33232.1
Conserved secreted Zn-dependent enzyme; COG2866 Predicted carboxypeptidase.
       0.423
EAQ33229.1
COG0168 Trk-type K+ transport systems, membrane components.
       0.402
EAQ33230.1
COG0569 K+ transport systems, NAD-binding component.
       0.402
EAQ33231.1
GGDEF domain protein; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
       0.402
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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