Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ33278.1Putative DNA repair helicase; COG3886 Predicted HKD family nuclease. (713 aa)    
Predicted Functional Partners:
EAQ33276.1
ABC transporter ATP-binding protein; COG0419 ATPase involved in DNA repair.
 
  
 0.922
EAQ31488.1
COG1199 Rad3-related DNA helicases.
   
 0.831
EAQ33338.1
DNA polymerase I; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
  
 0.805
EAQ31003.1
COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit.
    
  0.804
EAQ31379.1
COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit.
   
  0.797
EAQ33275.1
Hypothetical protein.
       0.773
EAQ33277.1
Hypothetical protein.
       0.773
rpoZ
DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
  0.661
EAQ33274.1
Hypothetical protein.
 
     0.568
EAQ33273.1
Putative ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
    0.539
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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