STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ33307.1COG0582 Integrase. (392 aa)    
Predicted Functional Partners:
EAQ33308.1
Hypothetical protein; COG1349 Transcriptional regulators of sugar metabolism.
 
     0.959
EAQ33309.1
Transcriptional regulator, Cro/CI family protein; COG3655 Predicted transcriptional regulator.
 
     0.871
EAQ33306.1
CMP-binding protein; COG3481 Predicted HD-superfamily hydrolase.
 
     0.782
EAQ33305.1
Hypothetical protein; Similar to myosin heavy chain gizzard smooth muscle; COG0542 ATPases with chaperone activity, ATP-binding subunit.
       0.519
EAQ33304.1
Hypothetical protein.
       0.459
EAQ32306.1
Hypothetical protein.
  
     0.445
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.