STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ33312.1Hypothetical protein. (330 aa)    
Predicted Functional Partners:
EAQ31081.1
NifS; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
 0.888
EAQ32545.1
COG1145 Ferredoxin.
  
 
 0.881
EAQ31708.1
Fumarase B; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.854
EAQ31541.1
COG0716 Flavodoxins.
   
 0.847
EAQ31453.1
COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase.
  
 
  0.847
EAQ31907.1
Putatve zinc-binding dehydrogenase; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
     
 0.787
fadH
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
   
 0.784
EAQ30918.1
Glutamate synthase, small subunit; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
    
 0.763
EAQ31801.1
COG0492 Thioredoxin reductase.
   
 
 0.662
nfuA
Hypothetical protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
 
 0.649
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.