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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ33319.1COG1680 Beta-lactamase class C and other penicillin binding proteins. (529 aa)    
Predicted Functional Partners:
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; COG0518 GMP synthase - Glutamine amidotransferase domain.
     
 0.800
EAQ30952.1
COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases.
  
     0.545
EAQ33320.1
TonB-dependent ferric achromobactin receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.493
EAQ33321.1
Hypothetical protein; COG3182 Uncharacterized iron-regulated membrane protein.
       0.493
EAQ32505.1
PTS system, glucose-specific IIA component; COG2190 Phosphotransferase system IIA components.
  
  
 0.491
EAQ32230.1
Dipeptidyl aminopeptidase; COG0823 Periplasmic component of the Tol biopolymer transport system.
  
     0.485
EAQ32457.1
Glucan 1,4-beta-glucosidase; COG1472 Beta-glucosidase-related glycosidases.
 
 
 0.431
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.