STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ31257.1COG1960 Acyl-CoA dehydrogenases. (593 aa)    
Predicted Functional Partners:
EAQ31192.1
Fatty oxidation complex, alpha subunit; COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.982
EAQ33352.1
Fatty acid oxidation complex alpha subunit; COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.972
EAQ30936.1
COG2025 Electron transfer flavoprotein, alpha subunit.
 0.913
EAQ30935.1
COG2086 Electron transfer flavoprotein, beta subunit.
 
 
 0.875
EAQ31256.1
Predicted membrane protein; COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1.
       0.856
EAQ30865.1
Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.779
ribD
Riboflavin-specific deaminase/reductase; COG0117 Pyrimidine deaminase.
   
 0.772
EAQ31459.1
Enoyl-CoA hydratase/isomerase family protein; COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
  0.759
EAQ31678.1
COG5016 Pyruvate/oxaloacetate carboxyltransferase.
     
 0.750
EAQ33061.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
 
 0.743
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.