STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ31267.1PilT; COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT. (344 aa)    
Predicted Functional Partners:
EAQ31602.1
Type II pili prepilin peptidase PilD/XcpA; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.894
EAQ31266.1
Phosphodiesterase/alkaline phosphatase D family enzyme.
       0.831
EAQ31601.1
COG1459 Type II secretory pathway, component PulF.
 
   
 0.804
EAQ31351.1
COG1459 Type II secretory pathway, component PulF.
 
   
 0.804
EAQ31412.1
COG1459 Type II secretory pathway, component PulF.
 
   
 0.800
EAQ32627.1
COG4796 Type II secretory pathway, component HofQ.
 
   
 0.742
EAQ31268.1
Predicted enzyme with a TIM-barrel fold; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.668
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.668
EAQ31270.1
COG0762 Predicted integral membrane protein.
       0.668
EAQ31271.1
Uncharacterized conserved secreted protein.
       0.664
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.