STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ31267.1PilT; COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT. (344 aa)    
Predicted Functional Partners:
EAQ31602.1
Type II pili prepilin peptidase PilD/XcpA; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.857
EAQ31266.1
Phosphodiesterase/alkaline phosphatase D family enzyme.
       0.824
EAQ31601.1
COG1459 Type II secretory pathway, component PulF.
 
   
 0.792
EAQ31351.1
COG1459 Type II secretory pathway, component PulF.
 
   
 0.792
EAQ31412.1
COG1459 Type II secretory pathway, component PulF.
 
   
 0.787
EAQ32627.1
COG4796 Type II secretory pathway, component HofQ.
 
   
 0.648
EAQ31270.1
COG0762 Predicted integral membrane protein.
       0.632
EAQ31268.1
Predicted enzyme with a TIM-barrel fold; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.630
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.616
EAQ31271.1
Uncharacterized conserved secreted protein.
       0.616
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.