STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ31268.1Predicted enzyme with a TIM-barrel fold; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (231 aa)    
Predicted Functional Partners:
EAQ31270.1
COG0762 Predicted integral membrane protein.
 
  
 0.943
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
 
  
 0.867
EAQ31271.1
Uncharacterized conserved secreted protein.
       0.799
pgeF
Uncharacterized conserved membrane protein; Belongs to the multicopper oxidase YfiH/RL5 family.
  
  
 0.722
EAQ31267.1
PilT; COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT.
       0.630
EAQ31266.1
Phosphodiesterase/alkaline phosphatase D family enzyme.
       0.627
rpmC
COG0255 Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
   
    0.503
EAQ31425.1
COG0820 Predicted Fe-S-cluster redox enzyme; Belongs to the radical SAM superfamily. RlmN family.
 
     0.497
rplX
Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
   
    0.491
EAQ30999.1
COG0257 Ribosomal protein L36.
   
    0.482
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.