Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ31276.1OprF; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (362 aa)    
Predicted Functional Partners:
EAQ30781.1
COG0823 Periplasmic component of the Tol biopolymer transport system.
 
 0.854
EAQ31828.1
COG1749 Flagellar hook protein FlgE.
   
 0.747
flgC
COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.683
EAQ32716.1
COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
  
 
   0.659
flgG
COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.645
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; COG0518 GMP synthase - Glutamine amidotransferase domain.
  
 
  0.627
EAQ32718.1
COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
  
 
   0.619
EAQ32074.1
COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis.
   
 
 0.619
pstA
COG4985 ABC-type phosphate transport system, auxiliary component.
     
  0.597
lolA
Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
 
 0.594
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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