STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ31290.1COG1485 Predicted ATPase. (355 aa)    
Predicted Functional Partners:
EAQ32704.1
COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit.
 
    0.702
sdhA
COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
 
    0.696
EAQ31289.1
COG3118 Thioredoxin domain-containing protein.
       0.665
sdhC
COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
 
   
 0.515
EAQ31287.1
COG1012 NAD-dependent aldehyde dehydrogenases.
       0.481
EAQ31288.1
COG1012 NAD-dependent aldehyde dehydrogenases.
       0.481
EAQ31291.1
COG0733 Na+-dependent transporters of the SNF family.
       0.472
rpsI
COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
   0.457
EAQ31292.1
COG1444 Predicted P-loop ATPase fused to an acetyltransferase.
       0.426
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.