STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32961.1Outer membrane protein, probably efflux family protein; COG1538 Outer membrane protein. (171 aa)    
Predicted Functional Partners:
EAQ32963.1
Membrane-fusion protein, RND family efflux system component; COG0845 Membrane-fusion protein.
  
  0.867
EAQ32964.1
Metal efflux system membrane component (silver efflux pump related); COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
  0.811
EAQ32962.1
Outer membrane protein, probably efflux family protein; COG1538 Outer membrane protein.
      0.800
EAQ32935.1
Membrane-fusion protein, RND-like efflux system component; COG0845 Membrane-fusion protein.
  
 0.766
EAQ32779.1
COG1566 Multidrug resistance efflux pump.
  
 0.730
EAQ31366.1
Multidrug resistance efflux pump, HlyD family protein; COG1566 Multidrug resistance efflux pump.
  
 0.635
EAQ32981.1
ABC transporter permease; COG0845 Membrane-fusion protein.
  
  0.630
EAQ32965.1
Hypothetical protein.
       0.519
EAQ32960.1
Hypothetical protein.
       0.485
EAQ32918.1
Membrane-fusion protein, RND family efflux system component; COG0845 Membrane-fusion protein.
  
  0.437
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.