Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ32970.1Putative lipoprotein; COG2931 RTX toxins and related Ca2+-binding proteins. (918 aa)    
Predicted Functional Partners:
EAQ32969.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
   
 0.922
bamA
Bacterial surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.848
EAQ32511.1
COG3317 Uncharacterized lipoprotein.
  
 
 0.826
bamD
Competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
 
 0.823
EAQ33024.1
TPR repeats containing protein; COG0457 FOG: TPR repeat.
 
    0.736
EAQ32213.1
COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1.
   
   0.706
EAQ31420.1
COG2976 Uncharacterized protein conserved in bacteria.
  
    0.551
EAQ33029.1
TonB system biopolymer transport component; COG0419 ATPase involved in DNA repair.
 
     0.550
EAQ33025.1
Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
     0.546
EAQ31393.1
Oar-like outer membrane protein protein, OmpA family protein; COG2931 RTX toxins and related Ca2+-binding proteins.
  
     0.540
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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