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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32972.1COG0137 Argininosuccinate synthase. (400 aa)    
Predicted Functional Partners:
EAQ32971.1
COG0165 Argininosuccinate lyase.
 
 
 0.999
EAQ32973.1
COG0078 Ornithine carbamoyltransferase.
 
 
 0.999
EAQ32974.1
COG0548 Acetylglutamate kinase.
 
  
 0.994
EAQ32975.1
N-acetyl-gamma-glutamyl-phosphate reductase; COG0002 Acetylglutamate semialdehyde dehydrogenase.
 
  
 0.994
carB
COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ).
 
 
 0.986
EAQ32976.1
COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
  
 0.978
EAQ30917.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
 0.944
argD
Bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; COG4992 Ornithine/acetylornithine aminotransferase.
 
 
 0.938
EAQ32622.1
COG0527 Aspartokinases.
  
 
 0.933
EAQ31642.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
  
 0.874
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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