STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aceKCOG4579 Isocitrate dehydrogenase kinase/phosphatase. (566 aa)    
Predicted Functional Partners:
EAQ32979.1
COG2224 Isocitrate lyase.
 
  
 0.945
EAQ32981.1
ABC transporter permease; COG0845 Membrane-fusion protein.
       0.540
EAQ32982.1
ABC transporter, ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
       0.530
EAQ32983.1
ABC transporter ATP-binding protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
       0.523
EAQ32978.1
COG2225 Malate synthase.
  
  
 0.461
EAQ32985.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator.
       0.431
EAQ32984.1
ABC transporter permease; COG0577 ABC-type antimicrobial peptide transport system, permease component.
       0.430
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.