STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ33067.1COG0584 Glycerophosphoryl diester phosphodiesterase. (342 aa)    
Predicted Functional Partners:
EAQ32589.1
COG2267 Lysophospholipase.
    
  0.906
EAQ32207.1
COG0584 Glycerophosphoryl diester phosphodiesterase.
  
  
 0.786
EAQ33068.1
COG0031 Cysteine synthase.
       0.773
EAQ31925.1
Hypothetical protein; COG0584 Glycerophosphoryl diester phosphodiesterase.
  
  
 0.666
pgsA
COG0558 Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.555
EAQ31725.1
COG3540 Phosphodiesterase/alkaline phosphatase D.
 
 
 0.507
EAQ33069.1
COG0347 Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
       0.506
EAQ33070.1
COG0004 Ammonia permease.
  
    0.489
EAQ31815.1
COG0558 Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.442
pstA
COG4985 ABC-type phosphate transport system, auxiliary component.
   
  
 0.412
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.