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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ33068.1COG0031 Cysteine synthase. (352 aa)    
Predicted Functional Partners:
cysE
COG1045 Serine acetyltransferase.
 
 0.980
EAQ31898.1
COG1045 Serine acetyltransferase.
 
 0.942
EAQ33182.1
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
 
 0.938
cysS
COG0215 Cysteinyl-tRNA synthetase.
  
 0.937
EAQ32992.1
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
 
 0.933
trpC
Bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; COG0134 Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
    
 0.904
EAQ31081.1
NifS; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
 
 0.890
EAQ32622.1
COG0527 Aspartokinases.
  
 
 0.889
EAQ32035.1
Methionine gamma-lyase; COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
  
 0.843
EAQ32397.1
COG1932 Phosphoserine aminotransferase.
  
 
 0.834
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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