Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ33070.1COG0004 Ammonia permease. (392 aa)    
Predicted Functional Partners:
EAQ33069.1
COG0347 Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
 0.999
EAQ32878.1
COG0347 Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
 0.998
EAQ32932.1
COG0347 Nitrogen regulatory protein PII.
  
 0.941
EAQ30917.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
 
  
 0.921
EAQ32593.1
COG3852 Signal transduction histidine kinase, nitrogen specific.
  
 
 0.820
EAQ31681.1
Hybrid sensor histidine kinase (HisK, 2 CheY, Hpt domains); COG0642 Signal transduction histidine kinase.
  
  0.774
EAQ32556.1
Intracellular signaling protein (PAS,GGDEF domains); COG2199 FOG: GGDEF domain.
 
   
  0.734
glnA
COG0174 Glutamine synthetase.
  
  
 0.699
nadE
NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
 
   
 0.665
EAQ30851.1
COG2198 FOG: HPt domain.
    
 0.643
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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