STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ33075.1Probable transcriptional regulator, ArsR family protein; COG0640 Predicted transcriptional regulators. (115 aa)    
Predicted Functional Partners:
EAQ33073.1
COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
       0.752
EAQ33074.1
Membrane-anchored signaling protein (PAS,GGDEF,EAL domains); COG2199 FOG: GGDEF domain.
       0.752
EAQ33072.1
COG0628 Predicted permease.
       0.531
EAQ32790.1
Uncharacterized conserved membrane protein; COG0607 Rhodanese-related sulfurtransferase.
 
    0.463
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.