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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ31407.1COG3156 Type II secretory pathway, component PulK. (322 aa)    
Predicted Functional Partners:
EAQ31408.1
COG4795 Type II secretory pathway, component PulJ.
 
 
 0.999
EAQ31409.1
COG2165 Type II secretory pathway, pseudopilin PulG.
 
 
 0.998
EAQ31411.1
COG2165 Type II secretory pathway, pseudopilin PulG.
 
 
 0.986
EAQ31410.1
COG2165 Type II secretory pathway, pseudopilin PulG.
 
 
 0.979
gspD
COG1450 Type II secretory pathway, component PulD.
 
   
 0.966
EAQ31406.1
COG3297 Type II secretory pathway, component PulL.
 
  
 0.965
gspC
COG3031 Type II secretory pathway, component PulC.
 
  
 0.963
EAQ31405.1
COG3149 Type II secretory pathway, component PulM.
 
  
 0.904
EAQ31412.1
COG1459 Type II secretory pathway, component PulF.
 
   
 0.899
EAQ31413.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
  
 0.890
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.