Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ31420.1COG2976 Uncharacterized protein conserved in bacteria. (205 aa)    
Predicted Functional Partners:
EAQ31421.1
COG0124 Histidyl-tRNA synthetase.
  
    0.974
bamB
Secreted protein containing PQQ-type beta-propeller repeats; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
    0.971
EAQ31418.1
GTP-binding protein EngA; COG1160 Predicted GTPases; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
    0.868
EAQ31634.1
COG2969 Stringent starvation protein B.
  
    0.770
EAQ31423.1
Predicted transcriptional regulator, contains N-terminal xre-type HTH domain; COG1426 Uncharacterized protein conserved in bacteria.
 
    0.763
EAQ31506.1
COG0526 Thiol-disulfide isomerase and thioredoxins.
  
    0.716
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.
  
    0.698
mreD
Rod shape-determining protein; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.
  
     0.667
holA
COG1466 DNA polymerase III, delta subunit.
  
     0.666
EAQ32062.1
COG2919 Septum formation initiator.
  
    0.650
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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