Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ31581.1Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator. (291 aa)    
Predicted Functional Partners:
EAQ31330.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator.
  
     0.723
EAQ31579.1
RND family efflux transporter; COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.660
EAQ31580.1
COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.660
EAQ31582.1
Aconitate hydratase; COG1049 Aconitase B.
       0.610
EAQ31254.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator.
  
     0.600
EAQ33086.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.531
EAQ31763.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator.
  
     0.491
EAQ33303.1
COG0583 Transcriptional regulator.
  
     0.474
EAQ32140.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator.
  
     0.471
EAQ32959.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.424
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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