Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ31602.1Type II pili prepilin peptidase PilD/XcpA; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (286 aa)    
Predicted Functional Partners:
EAQ31601.1
COG1459 Type II secretory pathway, component PulF.
 
  
 0.975
EAQ31600.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
 
 0.969
EAQ31267.1
PilT; COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT.
 
   
 0.894
coaE
Kinase, putative; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
    0.893
EAQ31412.1
COG1459 Type II secretory pathway, component PulF.
 
  
 0.873
EAQ31351.1
COG1459 Type II secretory pathway, component PulF.
 
  
 0.873
EAQ31599.1
Pilin protein PilA; COG4969 Tfp pilus assembly protein, major pilin PilA.
     
 0.848
EAQ31413.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
 
 0.844
EAQ31352.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
 
 0.843
EAQ32714.1
DNA uptake-related membrane-associated competence protein; COG0658 Predicted membrane metal-binding protein.
 
  
 0.834
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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