Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ31344.1Type II secretory pathway component; COG0013 Alanyl-tRNA synthetase. (137 aa)    
Predicted Functional Partners:
EAQ31345.1
Tfp-like pilus assembly protein.
 
     0.960
EAQ31346.1
Pilin protein.
 
     0.958
EAQ31347.1
Type II secretory pathway component.
 
     0.946
EAQ31343.1
Type II secretory pathway component.
 
     0.915
EAQ31348.1
Type II secretory pathway, pseudopilin.
 
     0.900
EAQ31358.1
Type II secretory pathway component.
 
  
 0.891
EAQ31349.1
Pilin protein; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
 
     0.886
EAQ31357.1
Type II secretory pathway component.
 
     0.880
EAQ31359.1
Type II secretory pathway component; COG4972 Tfp pilus assembly protein, ATPase PilM.
 
   
 0.872
EAQ31355.1
COG4796 Type II secretory pathway, component HofQ.
 
     0.862
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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