Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
EAQ31350.1Predicted Type II secretory pathway component. (152 aa)    
Predicted Functional Partners:
EAQ31358.1
Type II secretory pathway component.
  
    0.846
EAQ31354.1
General secretion pathway protein, ATPase; COG3267 Type II secretory pathway, component ExeA (predicted ATPase).
  
    0.838
EAQ31359.1
Type II secretory pathway component; COG4972 Tfp pilus assembly protein, ATPase PilM.
  
    0.835
EAQ31351.1
COG1459 Type II secretory pathway, component PulF.
       0.834
EAQ31352.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
       0.834
EAQ31355.1
COG4796 Type II secretory pathway, component HofQ.
       0.815
EAQ31357.1
Type II secretory pathway component.
       0.815
EAQ31353.1
Membrane associated TPR repeats containing protein; COG0457 FOG: TPR repeat.
       0.783
EAQ31356.1
Type II secretory pathway component.
       0.746
EAQ31349.1
Pilin protein; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
       0.674
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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