Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ31356.1Type II secretory pathway component. (117 aa)    
Predicted Functional Partners:
EAQ31355.1
COG4796 Type II secretory pathway, component HofQ.
       0.773
EAQ31357.1
Type II secretory pathway component.
       0.773
EAQ31358.1
Type II secretory pathway component.
       0.773
EAQ31359.1
Type II secretory pathway component; COG4972 Tfp pilus assembly protein, ATPase PilM.
       0.773
EAQ31350.1
Predicted Type II secretory pathway component.
       0.746
EAQ31351.1
COG1459 Type II secretory pathway, component PulF.
       0.746
EAQ31352.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
       0.746
EAQ31353.1
Membrane associated TPR repeats containing protein; COG0457 FOG: TPR repeat.
       0.746
EAQ31354.1
General secretion pathway protein, ATPase; COG3267 Type II secretory pathway, component ExeA (predicted ATPase).
       0.746
EAQ31349.1
Pilin protein; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
       0.590
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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