Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ31365.1COG1289 Predicted membrane protein. (341 aa)    
Predicted Functional Partners:
EAQ31366.1
Multidrug resistance efflux pump, HlyD family protein; COG1566 Multidrug resistance efflux pump.
 
     0.952
EAQ31367.1
Transcriptional regulator, MarR family protein; COG1846 Transcriptional regulators.
 
     0.942
EAQ32404.1
COG0695 Glutaredoxin and related proteins.
  
     0.571
EAQ31364.1
Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like; COG2202 FOG: PAS/PAC domain.
       0.528
EAQ31368.1
COG0629 Single-stranded DNA-binding protein.
       0.464
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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