EAQ30878.1 protein (Idiomarina baltica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EAQ30878.1

Uncharacterized conserved protein, containing 2 CBS domains; COG0517 FOG: CBS domain. (165 aa)

Predicted Functional Partners:

guaA

0.790

EAQ30877.1

0.634

rmf

0.529

EAQ30876.1

0.443

EAQ30797.1

0.435

EAQ30798.1

0.425

EAQ31399.1

0.418

Your Current Organism:

Idiomarina baltica

NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ30797.1	EAQ30798.1	OS145_05750	OS145_05755	Uncharacterized conserved secreted protein.	Chemotaxis protein CheX; COG1406 Predicted inhibitor of MCP methylation, homolog of CheC.	0.815
EAQ30797.1	EAQ30878.1	OS145_05750	OS145_05830	Uncharacterized conserved secreted protein.	Uncharacterized conserved protein, containing 2 CBS domains; COG0517 FOG: CBS domain.	0.435
EAQ30798.1	EAQ30797.1	OS145_05755	OS145_05750	Chemotaxis protein CheX; COG1406 Predicted inhibitor of MCP methylation, homolog of CheC.	Uncharacterized conserved secreted protein.	0.815
EAQ30798.1	EAQ30878.1	OS145_05755	OS145_05830	Chemotaxis protein CheX; COG1406 Predicted inhibitor of MCP methylation, homolog of CheC.	Uncharacterized conserved protein, containing 2 CBS domains; COG0517 FOG: CBS domain.	0.425
EAQ30876.1	EAQ30877.1	OS145_05820	OS145_05825	Phenazine biosynthesis protein, PhzF family protein; COG0384 Predicted epimerase, PhzC/PhzF homolog.	Hypothetical protein.	0.529
EAQ30876.1	EAQ30878.1	OS145_05820	OS145_05830	Phenazine biosynthesis protein, PhzF family protein; COG0384 Predicted epimerase, PhzC/PhzF homolog.	Uncharacterized conserved protein, containing 2 CBS domains; COG0517 FOG: CBS domain.	0.443
EAQ30877.1	EAQ30876.1	OS145_05825	OS145_05820	Hypothetical protein.	Phenazine biosynthesis protein, PhzF family protein; COG0384 Predicted epimerase, PhzC/PhzF homolog.	0.529
EAQ30877.1	EAQ30878.1	OS145_05825	OS145_05830	Hypothetical protein.	Uncharacterized conserved protein, containing 2 CBS domains; COG0517 FOG: CBS domain.	0.634
EAQ30878.1	EAQ30797.1	OS145_05830	OS145_05750	Uncharacterized conserved protein, containing 2 CBS domains; COG0517 FOG: CBS domain.	Uncharacterized conserved secreted protein.	0.435
EAQ30878.1	EAQ30798.1	OS145_05830	OS145_05755	Uncharacterized conserved protein, containing 2 CBS domains; COG0517 FOG: CBS domain.	Chemotaxis protein CheX; COG1406 Predicted inhibitor of MCP methylation, homolog of CheC.	0.425
EAQ30878.1	EAQ30876.1	OS145_05830	OS145_05820	Uncharacterized conserved protein, containing 2 CBS domains; COG0517 FOG: CBS domain.	Phenazine biosynthesis protein, PhzF family protein; COG0384 Predicted epimerase, PhzC/PhzF homolog.	0.443
EAQ30878.1	EAQ30877.1	OS145_05830	OS145_05825	Uncharacterized conserved protein, containing 2 CBS domains; COG0517 FOG: CBS domain.	Hypothetical protein.	0.634
EAQ30878.1	EAQ31399.1	OS145_05830	OS145_04740	Uncharacterized conserved protein, containing 2 CBS domains; COG0517 FOG: CBS domain.	COG0516 IMP dehydrogenase/GMP reductase.	0.418
EAQ30878.1	guaA	OS145_05830	OS145_04735	Uncharacterized conserved protein, containing 2 CBS domains; COG0517 FOG: CBS domain.	Bifunctional GMP synthase/glutamine amidotransferase protein; COG0518 GMP synthase - Glutamine amidotransferase domain.	0.790
EAQ30878.1	rmf	OS145_05830	OS145_06187	Uncharacterized conserved protein, containing 2 CBS domains; COG0517 FOG: CBS domain.	Ribosome modulation factor; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes); Belongs to the ribosome modulation factor family.	0.529
EAQ31399.1	EAQ30878.1	OS145_04740	OS145_05830	COG0516 IMP dehydrogenase/GMP reductase.	Uncharacterized conserved protein, containing 2 CBS domains; COG0517 FOG: CBS domain.	0.418
EAQ31399.1	guaA	OS145_04740	OS145_04735	COG0516 IMP dehydrogenase/GMP reductase.	Bifunctional GMP synthase/glutamine amidotransferase protein; COG0518 GMP synthase - Glutamine amidotransferase domain.	0.999
guaA	EAQ30878.1	OS145_04735	OS145_05830	Bifunctional GMP synthase/glutamine amidotransferase protein; COG0518 GMP synthase - Glutamine amidotransferase domain.	Uncharacterized conserved protein, containing 2 CBS domains; COG0517 FOG: CBS domain.	0.790
guaA	EAQ31399.1	OS145_04735	OS145_04740	Bifunctional GMP synthase/glutamine amidotransferase protein; COG0518 GMP synthase - Glutamine amidotransferase domain.	COG0516 IMP dehydrogenase/GMP reductase.	0.999
rmf	EAQ30878.1	OS145_06187	OS145_05830	Ribosome modulation factor; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes); Belongs to the ribosome modulation factor family.	Uncharacterized conserved protein, containing 2 CBS domains; COG0517 FOG: CBS domain.	0.529