Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mltGAminodeoxychorismate lyase related protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. (331 aa)    
Predicted Functional Partners:
pabC
4-amino-4-deoxychorismate lyase; COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase.
  
  
 0.884
EAQ30885.1
Mg-dependent Dnase-like protein; COG0084 Mg-dependent DNase.
      0.856
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
  
 0.852
EAQ30883.1
DNA polymerase III, delta prime subunit, ATPase; COG0470 ATPase involved in DNA replication.
  
  
 0.849
EAQ32366.1
Peptidoglycan synthetase; COG0744 Membrane carboxypeptidase (penicillin-binding protein).
  
   
 0.624
EAQ31020.1
COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
  
   
 0.599
EAQ33340.1
COG0169 Shikimate 5-dehydrogenase.
  
    0.557
EAQ32623.1
Peptidoglycan synthetase; COG5009 Membrane carboxypeptidase/penicillin-binding protein.
  
   
 0.555
EAQ31114.1
Rod shape-determining protein; Involved in formation and maintenance of cell shape.
 
  
 0.554
EAQ31301.1
COG0116 Predicted N6-adenine-specific DNA methylase.
  
    0.546
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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