Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
EAQ31310.1Carboxyl-terminal protease, periplasmic; COG0793 Periplasmic protease; Belongs to the peptidase S41A family. (686 aa)    
Predicted Functional Partners:
EAQ31124.1
NlpI-like lipoprotein; May be involved in cell division.
  
 
 
 0.889
proQ
Putative solute/DNA competence effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
 
  
 0.857
EAQ31313.1
COG1956 GAF domain-containing protein.
     
 0.827
EAQ31314.1
COG3139 Uncharacterized protein conserved in bacteria.
 
     0.812
EAQ31312.1
Hypothetical protein.
       0.788
EAQ31315.1
COG4640 Predicted membrane protein.
       0.788
EAQ31307.1
COG0308 Aminopeptidase N.
       0.621
EAQ31316.1
Na(+)-linked D-alanine and glycine permease; COG1115 Na+/alanine symporter.
       0.604
EAQ33168.1
Membrane-associated metallopeptidase, NlpD family protein; COG4942 Membrane-bound metallopeptidase.
  
  
 0.601
EAQ31308.1
COG1757 Na+/H+ antiporter.
       0.600
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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