STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ31758.1Prophage CP4-57 regulatory protein-like protein; COG3311 Predicted transcriptional regulator. (68 aa)    
Predicted Functional Partners:
EAQ30917.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
  0.832
EAQ31759.1
Hypothetical protein.
       0.661
EAQ32846.1
COG0582 Integrase.
 
  
 0.640
EAQ31781.1
COG0582 Integrase.
 
  
 0.633
EAQ32310.1
COG0582 Integrase.
 
   
 0.593
EAQ31757.1
COG2003 DNA repair proteins.
       0.532
EAQ32578.1
Site-specific recombinase, phage integrase family protein; COG0582 Integrase.
 
  
 0.471
EAQ31760.1
Hypothetical protein.
       0.445
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.