STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32003.1Probable regulator for asnA, asnC and gidA, lpr family protein; COG1522 Transcriptional regulators. (152 aa)    
Predicted Functional Partners:
EAQ32505.1
PTS system, glucose-specific IIA component; COG2190 Phosphotransferase system IIA components.
   
 
  0.824
EAQ30810.1
Biotin operon repressor/biotin--protein ligase fusion protein; COG1654 Biotin operon repressor.
   
 
 0.803
EAQ32002.1
COG2502 Asparagine synthetase A.
       0.696
EAQ32004.1
Secreted protein containing N-terminal Zinc-dependentcarboxypeptidase related domain.
       0.559
EAQ30917.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
     
 0.505
EAQ30865.1
Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.497
EAQ32001.1
Hypothetical protein.
       0.445
EAQ32000.1
Hypothetical protein.
       0.414
recG
DNA helicase RecJ; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
    
 0.411
EAQ32126.1
Hydroxymethylglutaryl-CoA lyase; COG0119 Isopropylmalate/homocitrate/citramalate synthases.
    
  0.404
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.