Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rrtAPredicted membrane serine peptidase, rhomboid-like protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). (194 aa)    
Predicted Functional Partners:
EAQ33100.1
COG0860 N-acetylmuramoyl-L-alanine amidase.
   
   0.732
EAQ32930.1
Hypothetical protein; COG1393 Arsenate reductase and related proteins, glutaredoxin family.
  
     0.707
EAQ32025.1
Gamma-glutamyltranspeptidase; COG0405 Gamma-glutamyltransferase.
       0.677
EAQ31410.1
COG2165 Type II secretory pathway, pseudopilin PulG.
 
     0.530
EAQ32932.1
COG0347 Nitrogen regulatory protein PII.
  
     0.504
gspC
COG3031 Type II secretory pathway, component PulC.
 
     0.489
EAQ32917.1
Outer membrane protein, probably efflux family protein; COG1538 Outer membrane protein.
  
     0.468
EAQ33320.1
TonB-dependent ferric achromobactin receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.459
EAQ32948.1
COG1826 Sec-independent protein secretion pathway components.
   
 
 0.457
EAQ32264.1
Putative TatA protein; COG1826 Sec-independent protein secretion pathway components.
   
 
 0.457
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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