Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phhACOG3186 Phenylalanine-4-hydroxylase. (264 aa)    
Predicted Functional Partners:
EAQ32033.1
COG2154 Pterin-4a-carbinolamine dehydratase.
  
 0.999
EAQ32031.1
COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins.
 
  
 0.963
EAQ32030.1
COG3508 Homogentisate 1,2-dioxygenase.
 
  
 0.949
tyrA
COG1605 Chorismate mutase.
     
 0.942
EAQ32396.1
Putative aminotransferase; COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase.
     
 0.925
hisC
COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.925
EAQ31642.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
   
 
 0.917
EAQ33324.1
COG0077 Prephenate dehydratase.
     
 0.914
EAQ31570.1
Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.
     
 0.906
maiA
COG0625 Glutathione S-transferase.
 
  
 0.878
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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