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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32036.1COG3768 Predicted membrane protein. (325 aa)    
Predicted Functional Partners:
EAQ32037.1
COG3106 Predicted ATPase.
 
  
 0.993
pspC
COG1983 Putative stress-responsive transcriptional regulator.
     
 0.858
EAQ32039.1
Phage shock protein B; COG0419 ATPase involved in DNA repair.
     
 0.858
pspA
COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription.
     
 0.768
EAQ32035.1
Methionine gamma-lyase; COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
       0.548
EAQ32042.1
COG0747 ABC-type dipeptide transport system, periplasmic component.
       0.527
EAQ32589.1
COG2267 Lysophospholipase.
  
     0.522
EAQ32044.1
COG4171 ABC-type antimicrobial peptide transport system, permease component.
       0.513
EAQ32045.1
COG4170 ABC-type antimicrobial peptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
       0.513
EAQ32046.1
COG4167 ABC-type antimicrobial peptide transport system, ATPase component.
       0.513
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.